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Associated diseases

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GREMLIN specifications


Unique identifier OMICS_06144
Alternative name Genome Rearrangement Explorer with Multi-scale,Linked INteractions
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Medium
Stability Stable
Maintained Yes


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Publication for Genome Rearrangement Explorer with Multi-scale,Linked INteractions

GREMLIN in publication

PMCID: 3706894
PMID: 23363777
DOI: 10.1186/gm413

[…] is that it falls short in visualizing extensive genomic rearrangements. the circular layout of circos can compensate for this deficit, or it can be resolved by the use of specific tools such as gremlin []. many other tools also perform specific tasks, exploiting the genomic coordinates representation scheme. for example, putative translocation events can be verified by the command-line tool […]

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GREMLIN institution(s)
Computer Science Department, Brown University, Providence, RI, USA

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