GRep statistics

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Citations per year

Number of citations per year for the bioinformatics software tool GRep
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Tool usage distribution map

This map represents all the scientific publications referring to GRep per scientific context
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Associated diseases

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Popular tool citations

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GRep specifications

Information


Unique identifier OMICS_33749
Name GRep
Alternative name Gene set Representation
Software type Application/Script
Interface Command line interface
Restrictions to use None
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Russ B. Altman

Publication for Gene set Representation

GRep citation

library_books

Gene Expression Variation Resolves Species and Individual Strains among Coral Associated Dinoflagellates within the Genus Symbiodinium

2016
Genome Biol Evol
PMCID: 4824173
PMID: 26868597
DOI: 10.1093/gbe/evw019

[…] n agreement with previously published Clade B Symbiodinium transcriptomes (; ; ). After uploading reference assemblies into IPA software, we identified 19 relevant canonical pathways with significant gene set representation in all species, including fatty acid beta-oxidation, nitric oxide signaling, oxidative stress response, cell cycle control, RNA processes, and protein ubiquitination (supplemen […]


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GRep institution(s)
Department of Bioengineering, Stanford University, Stanford, CA, USA; Department of Genetics, Stanford University, Stanford, CA, USA

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