Grinn statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Grinn

Tool usage distribution map

This map represents all the scientific publications referring to Grinn per scientific context
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Grinn specifications


Unique identifier OMICS_12505
Name Grinn
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data Genomic, proteomic, and metabolomic data
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.7
Stability Stable
Maintained Yes




No version available



  • person_outline Kwanjeera W.

Grinn citations


Assessing Performance of Spore Samplers in Monitoring Aeromycobiota and Fungal Plant Pathogen Diversity in Canada

Appl Environ Microbiol
PMCID: 5930333
PMID: 29475862
DOI: 10.1128/AEM.02601-17

[…] igh humidity is essential for growth of most mesophilic fungi and was considered a good predictor of fungal prevalence. The total variance explained by the RDA model (ca. 22%) was higher than that of Grinn-Gofroń and Bosiacka () (ca. 16.5%) and suggested that mean air temperature was the most important factor affecting the composition of airborne fungal spores. Overall, our results suggest that th […]


A comparative study of hourly and daily relationships between selected meteorological parameters and airborne fungal spore composition

PMCID: 5818593
PMID: 29497241
DOI: 10.1007/s10453-017-9493-3
call_split See protocol

[…] analysis (DCA) results detected a linear structure of the spore data. Detailed information about the applied multivariate methods, stepwise forward selection and tests of significance is available in Grinn-Gofroń and Bosiacka ().Redundancy among the meteorological variables was explored with the variance inflation factor (VIF). VIF analysis (available in CANOCO) is a diagnostic tool used to identi […]


Computational dynamic approaches for temporal omics data with applications to systems medicine

BioData Min
PMCID: 5473988
PMID: 28638442
DOI: 10.1186/s13040-017-0140-x

[…] he correlation analysis with other types of relationships such as biochemical reactions and molecular structural and mass spectral similarity (MetaMapR).In addition, they provide a dynamic interface (Grinn) to integrate gene, protein, and metabolite data using more advanced biological-network-based approaches such as Gaussian graphical models, partial correlation and Bayesian networks for omics da […]


Genomic, Proteomic, and Metabolomic Data Integration Strategies

PMCID: 4562606
PMID: 26396492
DOI: 10.4137/BMI.S29511

[…] tools such as MetaMapR incorporate correlation analysis with other relationships such as biochemical reactions and molecular structural and mass spectral similarity. The recently developed R package Grinn implements a Neo4j graph database to provide a dynamic interface to rapidly integrate gene, protein, and metabolite data using both biological-network-based and correlation-based approaches.Whil […]

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