GRYFUN statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Gene Ontology annotation chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

GRYFUN specifications

Information


Unique identifier OMICS_10364
Name GRYFUN
Interface Web user interface
Restrictions to use None
Input data GRYFUN accepts lists of UniProt accession numbers in order to create user-defined protein sets for subsequent annotation visualization and statistical assessment.
Computer skills Basic
Stability Stable
Requirements
GraphViz, PyGraphviz, NetworkX, Python
Maintained Yes

Download


Documentation


Maintainer


  • person_outline Hugo P. Bastos <>

Publication for GRYFUN

GRYFUN in publication

PMCID: 4917928
PMID: 27338101
DOI: 10.1186/s13326-016-0076-y

[…] on domain knowledge (confirmed and expected functional associations) and then making empirical assertions about the state of annotation completeness of each protein set. for that purpose we use gryfun [], a web application that we have previously developed. this application allows for annotation visualization coupled with statistical assessment (term-by-term enrichment) and is used […]


To access a full list of publications, you will need to upgrade to our premium service.

GRYFUN institution(s)
LaSIGE, Departamento de Informática, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal

GRYFUN review

star_border star_border star_border star_border star_border
star star star star star

Dmitry Magas'

star_border star_border star_border star_border star_border
star star star star star
Web
Too complicated, need clear and simple installation and usage instructions