GSA statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

Protocols

GSA specifications

Information


Unique identifier OMICS_20961
Name GSA
Alternative name Genome Sequence Archive
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainers


  • person_outline Wenming Zhao
  • person_outline Zhang Zhang
  • person_outline Hongxing Lei
  • person_outline Xiangdong Fang

Publication for Genome Sequence Archive

library_books

GSA: Genome Sequence Archive*

2017 Genomics Proteomics Bioinformatics
PMCID: 5339404
PMID: 28387199
DOI: 10.1016/j.gpb.2017.01.001

GSA citations

 (9)
call_split

Effect of Cinnamaldehyde and Citral Combination on Transcriptional Profile, Growth, Oxidative Damage and Patulin Biosynthesis of Penicillium expansum

2018
Front Microbiol
PMCID: 5884930
PMID: 29651282
DOI: 10.3389/fmicb.2018.00597
call_split See protocol

[…] ent analysis of DEGs by GO enrichment analysis (GOSeq Release2.12) and KEGG pathways analysis (KOBAS v2.0), were carried out based on a previous report (). The RNA-Seq data have been deposited in the Genome Sequence Archive in BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, with accession code CRA000582. […]

library_books

Ecological Restoration of Antibiotic Disturbed Gastrointestinal Microbiota in Foregut and Hindgut of Cows

2018
PMCID: 5859144
PMID: 29594071
DOI: 10.3389/fcimb.2018.00079

[…] es of detected OTUs or Shannon index in both foregut and hindgut demonstrated a high sequencing depth in current analysis (Supplementary Figure ). 16S rRNA gene sequencing reads were deposited in the Genome Sequence Archive (http://gsa.big.ac.cn) in the BIG Data Center under accession numbers PRJCA000455. […]

library_books

Functional Analysis of the FZF1 Genes of Saccharomyces uvarum

2018
Front Microbiol
PMCID: 5808186
PMID: 29467731
DOI: 10.3389/fmicb.2018.00096

[…] inic acid for 10 min. The RNA was prepared using Illumina TruSeq RNA-Seq kits, and RNA-Seq was performed by Nextomics Biosciences Co. Ltd using Illumina HiSeq™. The RNA-Seq data were submitted to the Genome Sequence Archive of Beijing Institute of Genomics (BIG) Data Center (publicly accessible at http://gsa.big.ac.cn, Accession No. PRJCA000414). Transcriptome analysis was performed using DEGseq ( […]

call_split

Characterization of Transcription Factor Gene OsDRAP1 Conferring Drought Tolerance in Rice

2018
Front Plant Sci
PMCID: 5799227
PMID: 29449862
DOI: 10.3389/fpls.2018.00094
call_split See protocol

[…] ns were performed based on the Rice Genome Annotation Project version 7 (Kawahara et al., ). AgriGO was used to perform GO enrichment analysis (Du et al., ). The raw RNA-seq data are available in the Genome Sequence Archive in BIG Data Center (Beijing Institute of Genomics, Chinese Academy of Sciences) under the accession number PRJCA000683. […]

library_books

Constitutive Expression of miR408 Improves Biomass and Seed Yield in Arabidopsis

2018
Front Plant Sci
PMCID: 5789609
PMID: 29422907
DOI: 10.3389/fpls.2017.02114

[…] elevant genes were those identified as differing in expression by at least 1.5-fold (p < 0.01) in the test and control samples. The raw sequence data reported in this paper have been deposited in the Genome Sequence Archive () in BIG Data Center (), Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, under accession number CRA000553 that are publicly accessible at http://bigd.big.ac. […]

call_split

Ribosome Profiling Reveals Genome wide Cellular Translational Regulation upon Heat Stress in Escherichia coli

2017
PMCID: 5673677
PMID: 29031842
DOI: 10.1016/j.gpb.2017.04.005
call_split See protocol

[…] or down-regulation in TE between the normal and heat-shock conditions were performed using DAVID Functional Annotation tools , .The raw sequence data reported in this paper have been deposited in the Genome Sequence Archive in BIG Data Center , Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, under accession number CRA 000347, that is publicly accessible at http://bigd.big.ac.cn/ […]

Citations

Looking to check out a full list of citations?

GSA institution(s)
BIG Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China; CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China; Collaborative Innovation Center of Genetics and Development, Fudan University, Shanghai, China; Center of Alzheimer’s Disease, Beijing Institute for Brain Disorders, Beijing, China
GSA funding source(s)
Supported by grants from the Strategic Priority Research Program of the Chinese Academy of Sciences (Grant Nos. XDB13040500 and XDA08020102); the National High-tech R&D Program (863 Program; Grant Nos. 2014AA021503 and 2015AA020108); the National Key Research Program of China (Grant Nos. 2016YFC0901603, 2016YFB0201702, 2016YFC0901903, and 2016YFC0901701); the International Partnership Program of the Chinese Academy of Sciences (Grant No. 153F11KYSB20160008); the Key Program of the Chinese Academy of Sciences (Grant No. KJZD-EW-L14); the Key Technology Talent Program of the Chinese Academy of Sciences (awarded to WZ); and the 100 Talent Program of the Chinese Academy of Sciences.

GSA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review GSA