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GSR specifications


Unique identifier OMICS_08966
Name GSR
Alternative name Genetic Simulation Resources
Restrictions to use None
Maintained Yes


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Publication for Genetic Simulation Resources

GSR citations


Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanisms

BMC Genomics
PMCID: 5824581
PMID: 29471790
DOI: 10.1186/s12864-018-4519-y

[…] e S2).Transcripts with significant effects of time*treatment in both replicated experiments were examined for non-random distributions of function using a functional enrichment Gene Score Resampling (GSR) analysis in ErmineJ []. Briefly, GSR analysis examines the distribution of functions (given by the Gene Ontology (GO) annotation from Zhang et al. []) in the transcripts of interest, and compares […]


Resting State BOLD Variability in Alzheimer’s Disease: A Marker of Cognitive Decline or Cerebrovascular Status?

PMCID: 5826397
PMID: 29515434
DOI: 10.3389/fnagi.2018.00039

[…] egistration of the structural image to standard stereotactic space was also applied to account for potential local deformations in brains of the patient group. Additionally, global signal regression (GSR) was performed to correct for confounding physiological noise and to improve the detection of localized variation in the BOLD signal (; ; ). […]


Electroencephalography Amplitude Modulation Analysis for Automated Affective Tagging of Music Video Clips

Front Comput Neurosci
PMCID: 5767842
PMID: 29367844
DOI: 10.3389/fncom.2017.00115

[…] dely obtained from physiological signals measured from the peripheral autonomic nervous system (PANS) (Nasoz et al., ; Lisetti and Nasoz, ; Wu and Parsons, ), particularly the galvanic skin response (GSR), a measure of the amount of sweat (conductivity) in the skin (Picard and Healey, ; Bersak et al., ). More recently, the interaction between the PANS and central nervous systems (CNS) was measured […]


Tousled like kinase 1 is a negative regulator of core transcription factors in murine embryonic stem cells

Sci Rep
PMCID: 5762884
PMID: 29321513
DOI: 10.1038/s41598-017-18628-9

[…] Mediatech Inc., Manassas, VA), 20 μg/mL ciprofloxacin (Sigma-Aldrich), 55 μM 2-mercaptoethanol (Gibco, Thermo Fisher Scientific, Waltham, MA), and 1000 U/mL of leukemia inhibitory factor (LIF; Cat. #GSR-7001; Global Stem, Gaithersburg, MD). ESCs were cultured in 0.1% gelatin-coated dishes and incubated at 37 °C and 5% CO2. Tlk1-knockdown stable cell lines were maintained in the same media as ment […]


Integrating the dysregulated inflammasome based molecular functionome in the malignant transformation of endometriosis associated ovarian carcinoma

PMCID: 5790494
PMID: 29423077
DOI: 10.18632/oncotarget.23364

[…] The GSR indices in each gene set were averaged then underwent hierarchical clustering with the function ‘heatmap.2’ in R package ‘gplots’ (version 3.0.1) as default. This function executed hierarchical cl […]


Global Electroencephalography Synchronization as a New Indicator for Tracking Emotional Changes of a Group of Individuals during Video Watching

Front Hum Neurosci
PMCID: 5717022
PMID: 29249947
DOI: 10.3389/fnhum.2017.00577

[…] ronize the video start times during EEG recording. EEG signals were recorded from 22 scalp positions (Cz, C3, C4, T7, T8, Pz, P3, P4, P7, P8, Fp1, Fp2, Fz, F3, F4, F7, F8, AFz, AF7, AF8, O1, and O2). GSR and PPG data were recorded using the same system (ActiveTwo). Two GSR electrodes were adhered to each participant's left index and middle fingers, and a PPG sensor was attached to one's right inde […]


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GSR institution(s)
Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX; Statistical Methodology and Applications Branch, Surveillance Research Program, Division of Cancer Control and Population Sciences, National Cancer Institute (NCI), National Institutes of Health (NIH), Bethesda, MD; Host Susceptibility Factors Branch, Epidemiology and Genomics Research Program, Division of Cancer Control and Population Sciences, NCI, NIH, Bethesda, MD; Cornerstone Systems Northwest, Inc. Lynden, WA
GSR funding source(s)
The development of GSR is supported by a contract HHSN261201100558P from the National Cancer Institute.

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