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|Alternative name||Genetic Simulation Resources|
|Restrictions to use||None|
- person_outline GSR
Publication for Genetic Simulation Resources
Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanisms
[…] e S2).Transcripts with significant effects of time*treatment in both replicated experiments were examined for non-random distributions of function using a functional enrichment Gene Score Resampling (GSR) analysis in ErmineJ . Briefly, GSR analysis examines the distribution of functions (given by the Gene Ontology (GO) annotation from Zhang et al. ) in the transcripts of interest, and compares […]
Resting State BOLD Variability in Alzheimer’s Disease: A Marker of Cognitive Decline or Cerebrovascular Status?
[…] egistration of the structural image to standard stereotactic space was also applied to account for potential local deformations in brains of the patient group. Additionally, global signal regression (GSR) was performed to correct for confounding physiological noise and to improve the detection of localized variation in the BOLD signal (; ; ). […]
Electroencephalography Amplitude Modulation Analysis for Automated Affective Tagging of Music Video Clips
[…] dely obtained from physiological signals measured from the peripheral autonomic nervous system (PANS) (Nasoz et al., ; Lisetti and Nasoz, ; Wu and Parsons, ), particularly the galvanic skin response (GSR), a measure of the amount of sweat (conductivity) in the skin (Picard and Healey, ; Bersak et al., ). More recently, the interaction between the PANS and central nervous systems (CNS) was measured […]
Tousled like kinase 1 is a negative regulator of core transcription factors in murine embryonic stem cells
[…] Mediatech Inc., Manassas, VA), 20 μg/mL ciprofloxacin (Sigma-Aldrich), 55 μM 2-mercaptoethanol (Gibco, Thermo Fisher Scientific, Waltham, MA), and 1000 U/mL of leukemia inhibitory factor (LIF; Cat. #GSR-7001; Global Stem, Gaithersburg, MD). ESCs were cultured in 0.1% gelatin-coated dishes and incubated at 37 °C and 5% CO2. Tlk1-knockdown stable cell lines were maintained in the same media as ment […]
Integrating the dysregulated inflammasome based molecular functionome in the malignant transformation of endometriosis associated ovarian carcinoma
[…] The GSR indices in each gene set were averaged then underwent hierarchical clustering with the function ‘heatmap.2’ in R package ‘gplots’ (version 3.0.1) as default. This function executed hierarchical cl […]
Global Electroencephalography Synchronization as a New Indicator for Tracking Emotional Changes of a Group of Individuals during Video Watching
[…] ronize the video start times during EEG recording. EEG signals were recorded from 22 scalp positions (Cz, C3, C4, T7, T8, Pz, P3, P4, P7, P8, Fp1, Fp2, Fz, F3, F4, F7, F8, AFz, AF7, AF8, O1, and O2). GSR and PPG data were recorded using the same system (ActiveTwo). Two GSR electrodes were adhered to each participant's left index and middle fingers, and a PPG sensor was attached to one's right inde […]
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