GTD specifications

Information


Unique identifier OMICS_28628
Name GTD
Alternative name The Genomic Threading Database
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainers


  • person_outline David Jones
  • person_outline Liam McGuffin

Publications for The Genomic Threading Database

GTD citation

library_books

Triangle network motifs predict complexes by complementing high error interactomes with structural information

2009
BMC Bioinformatics
PMCID: 2714575
PMID: 19558694
DOI: 10.1186/1471-2105-10-196

[…] T hits with an E-value ≤ 0.01 and a sequence identity percentage s ≥ 30%. In addition, we required 75% of the domain to appear in the protein.Other complementary datatypes (CD) edges we used included The Genomic Threading Database (GTD) []. GTD contains yeast protein assignments to SCOP domain structural annotations and interacting structures. An assigned Confidence value gives an indication of th […]

GTD institution(s)
Department of Computer Science, University College London, London, UK
GTD funding source(s)
Supported by the UK Biotechnology and Biological Sciences Research Council and the UK Department of Trade and Industry.

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