GTRAC statistics

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Associated diseases

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GTRAC specifications

Information


Unique identifier OMICS_12699
Name GTRAC
Alternative name GenoType Random Access Compressor
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 0.1.4
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Kedar Tatwawadi <>

Publication for GenoType Random Access Compressor

GTRAC in publications

 (2)
PMCID: 5322425
PMID: 28280485
DOI: 10.3389/fmicb.2017.00235

[…] genes identified a number of putative cargo loci on the prophage: independent transcriptional units that are not required for the prophage lytic or lysogenic cycles (). like p22, btp1 contains a gtrac operon (stmmw_03911-03921) (supplementary figure ) which encodes a glycosyltransferase enzyme that modifies the o-antigen of the bacterial lipopolysaccharide (). this glycosyltransferase […]

PMCID: 5056711
PMID: 27723778
DOI: 10.1371/journal.pone.0164441

[…] the likelihood plots for each run using tracer 1.6 (http://beast.bio.ed.ac.uk/tracer) and we accepted the results if ess values were >200. on the other hand, the ml inference was run under the gtrac model; invariable sites and gamma distribution were estimated independently for each partition during the run. node supports of the maximum likelihood analysis were estimated with 1,000 […]


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GTRAC institution(s)
Department of Electrical Engineering, Stanford University, Stanford, CA, USA
GTRAC funding source(s)
This work was partially supported by a fellowship from the Basque Government, a Stanford Graduate Fellowships Program in Science and Engineering, the Stanford Data Science Initiative (SDSI), and an NIH grant with number 1 U01 CA198943-01.

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