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Guide | A desktop application for analysing gene expression data

Analyses RNA-seq and microarray data. Guide can perform various analyses including differential expression at both gene and pathway levels. It returns the results in easy-to-use tables and figures. This tool offers features to personalize the application for advanced users and non-standard data. It is able to provide a full report generation feature on the dataset.

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Guide forum

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Guide classification

Guide specifications

Unique identifier:
OMICS_01405
Software type:
Application/Script
Restrictions to use:
None
Input format:
TXT
Programming languages:
R
Version:
1.2
Maintained:
Yes
Name:
Genome Informatics Data Explorer
Interface:
Command line interface
Input data:
Some summarised read counts.
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable

Guide distribution

versioning

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Guide support

Maintainer

  • Jarny Choi <>

Credits

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Publications

Institution(s)

The Walter and Eliza Hall Institute of Medical Research, Parkville, Melbourne, VIC, Australia; Department of Medical Biology, The University of Melbourne, Parkville, Melbourne, VIC, Australia

Funding source(s)

Supported by the Victorian State Government Operational Infrastructure Support and Australian Government NHMRC IRIIS; by the Science and Industry Endowment Fund, and by a grant provided by CSL Limited.

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.