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Citations per year

Number of citations per year for the bioinformatics software tool Gutentag

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Gutentag specifications


Unique identifier OMICS_02396
Name Gutentag
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available

Publication for Gutentag

Gutentag citations


Software aided approach to investigate peptide structure and metabolic susceptibility of amide bonds in peptide drugs based on high resolution mass spectrometry

PLoS One
PMCID: 5665424
PMID: 29091918
DOI: 10.1371/journal.pone.0186461

[…] MS/MS peptide data interpretation. These approaches include four main groups: database searching (SEQUEST, MASCOT, etc.), de novo peptide sequencing (PEAKS, PepNovo, etc.), peptide sequence tagging (GutenTag) and consensus of multiple search engines (Scaffold) []. These MS-based proteomics approaches have difficulties with sequencing cyclic peptides without prior linearization and they are limite […]


Identification and analysis of divergent immune gene families within the Tasmanian devil genome

BMC Genomics
PMCID: 4662006
PMID: 26611146
DOI: 10.1186/s12864-015-2206-9

[…] y TBLASTN [] searches to the Tasmanian devil genome using the relevant sequence in opossum or wallaby from the immunome database for marsupials and monotremes (IDMM;; []), or the relevant human sequences from UniProt when not available in marsupials. In addition, HMMER [] searches were used to identify genes in families likely to have expansions. To do th […]


Identification, characterisation and expression analysis of natural killer receptor genes in Chlamydia pecorum infected koalas (Phascolarctos cinereus)

BMC Genomics
PMCID: 4608214
PMID: 26471184
DOI: 10.1186/s12864-015-2035-x

[…] The data sets supporting the results of the article are available in the Immunome Database for Monotremes and Marsupials []. […]


Mass spectrometry based protein identification by integrating de novo sequencing with database searching

BMC Bioinformatics
PMCID: 3549845
PMID: 23369017
DOI: 10.1186/1471-2105-14-S2-S24

[…] , the identification process is able to incorporate information from the two heterogeneous approaches. This integrative approach has great potential and several methods have been developed, including GutenTag [], Inspect [], MultiTag [], etc. These methods perform favourably compared to existing database search and de novo sequencing methods. However, current implementation of this integrative app […]


Ancient Antimicrobial Peptides Kill Antibiotic Resistant Pathogens: Australian Mammals Provide New Options

PLoS One
PMCID: 3166071
PMID: 21912615
DOI: 10.1371/journal.pone.0024030

[…] GENESH+ based on HMMER results. These were confirmed by BLAST against NCBI's protein nr database. Platypus and tammar cathelicidin sequences can be downloaded from GenBank Accessions for previously published cathlicidin sequences , are MaeuCath1 EF624481.1, MaeuCath2 EF624482.1, MaeuCath3 EF624483.1, MaeuCath4 EF624484.1, MaeuCath5 EF624485, MaeuCath […]


Immunome database for marsupials and monotremes

BMC Immunol
PMCID: 3173380
PMID: 21854560
DOI: 10.1186/1471-2172-12-48

[…] IDMM is publicly available at […]

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Gutentag institution(s)
SR11 Department of Cell Biology, The Scripps Research Institute, La Jolla, CA, USA

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