gVolante statistics

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Citations per year

Number of citations per year for the bioinformatics software tool gVolante

Tool usage distribution map

This map represents all the scientific publications referring to gVolante per scientific context
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Associated diseases


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gVolante specifications


Unique identifier OMICS_19511
Name gVolante
Interface Web user interface
Restrictions to use None
Input data A sequence file.
Input format FASTA, GZ, TGZ, BZ2, TBZ, TAR, ZIP
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Shigehiro Kuraku

Publication for gVolante

gVolante citations


Differential gene expression revealed with RNA Seq and parallel genotype selection of the ornithine decarboxylase gene in fish inhabiting polluted areas

Sci Rep
PMCID: 5859300
PMID: 29556088
DOI: 10.1038/s41598-018-23182-z

[…] contigs, CD-HIT software (http://weizhong-lab.ucsd.edu/cd-hit/) was used with an identity cut-off threshold of 90%. “Bench-marking universal single-copy orthologs” (BUSCO) software (v2/v3) was run in gVolante to identify core genes, which is a set of single copy genes that are highly conserved among eukaryotes and thus expected to be present in a complete assembly. BUSCO analysis was performed usi […]


gVolante for standardizing completeness assessment of genome and transcriptome assemblies

PMCID: 5870689
PMID: 29036533
DOI: 10.1093/bioinformatics/btx445

[…] gVolante is a web server designed to make the best use of the reference gene set CVG previously introduced for more accurate completeness assessment for vertebrates (). It achieves a method of handy a […]

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gVolante institution(s)
Phyloinformatics Unit, RIKEN Center for Life Science Technologies, Yokohama, Japan
gVolante funding source(s)
Supported by the RIKEN Center for Life Science Technologies.

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