Genome-wide association analysis software tools and databases

Genome-wide association studies (GWASs) have been heralded as a major advance in biomedical discovery, having identified ~2,000 robust associations with complex diseases since 2005.Source text:(Manolio, 2013) Bringing genome-wide association findings into clinical use. Nat Rev…

GWAS analysis steps

Genome-wide association analysis software tools and databases

Most Recent Tools

Crush-MDR
Server

Crush-MDR

Employs an opportunistic evolutionary strategy designed to maximally utilize an…

Employs an opportunistic evolutionary strategy designed to maximally utilize an arbitrary collection of distributed compute nodes. Crush-MDR is a multi-objective evolutionary search engine for…

REALbreeding
Desktop

REALbreeding

Predicts untested single crosses (SCs) in plant breeding. REALbreeding aims to…

Predicts untested single crosses (SCs) in plant breeding. REALbreeding aims to assess the prediction efficiency by correlating the predicted and true genotypic values of untested SCs. It uses…

Mrrobust
Desktop

Mrrobust

Performs summary Mendelian Randomisation (MR) and instrumental variable…

Performs summary Mendelian Randomisation (MR) and instrumental variable analysis. Mrrobust can help users to estimate causal effects and permits to correct or attenuate bias thank to the utilization…

Genopedia
Dataset

Genopedia

Provides a gene-centered summary view of genetic association studies. The…

Provides a gene-centered summary view of genetic association studies. The system of Genopedia translates a gene name, gene symbol, gene alias or protein name entered by users. It displays information…

Most Popular Tools

PLINK
Desktop

PLINK

A free, open-source whole genome association analysis toolset, designed to…

A free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on…

CADD
Desktop

CADD Combined Annotation Dependent Depletion

Scores the deleteriousness of single nucleotide variants as well as…

Scores the deleteriousness of single nucleotide variants as well as insertion/deletions variants in the human genome. CADD integrates many diverse annotations into a quantitative score. The basis of…

i-GSEA4GWAS
Web

i-GSEA4GWAS improved GSEA for GWAS

A web-based resource for analysis of GWAS data to identify pathways/gene sets…

A web-based resource for analysis of GWAS data to identify pathways/gene sets correlated to certain traits by implementing an improved Gene Set Enrichment Analysis (i-GSEA) approach. i-GSEA4GWAS aims…

PANOGA
Web

PANOGA Pathway and Network Oriented GWAS Analysis

A web server for post-genome-wide associatio analysis. PANOGA supports pathway…

A web server for post-genome-wide associatio analysis. PANOGA supports pathway and network-oriented SNP–phenotype association analysis in a single system without requiring any additional manual…

Curators for GWAS analysis

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