GWAS.PC specifications


Unique identifier OMICS_24891
Alternative name GWAS Power Calculation
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained No


No version available


This tool is not available anymore.

Additional information

Publication for GWAS Power Calculation

GWAS.PC citation


ITGB5 and AGFG1 variants are associated with severity of airway responsiveness

BMC Med Genet
PMCID: 3765944
PMID: 23984888
DOI: 10.1186/1471-2350-14-86
call_split See protocol

[…] sate for the 4 times greater duration of administration of stimulus. Slope values were log-transformed so that they would follow a normal distribution. To compare DAG subjects to those of the primary GWAS, PC20 was calculated in 600 of the 650 subjects that had a 20% or greater drop in FEV1 at the highest provocation dose. Genotyping was performed using the Hapmap 317 K platform or Illumina 370 Du […]

GWAS.PC institution(s)
Clinical Epidemiology Research Center (CERC), Veterans Affairs (VA) Cooperative Studies Program, VA Connecticut Healthcare System, West Haven, CT, USA; Department of Biostatistics, Yale School of Public Health, New Haven, CT, USA; Department of Genetics, Yale University School of Medicine, New Haven, CT, USA; Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA; Massachusetts Area Veterans Epidemiology Research and Information Center (MAVERIC), VA Cooperative Studies Program, VA Boston Healthcare System, Boston, MA, USA; Department of Medicine, Harvard University School of Medicine, Boston, MA, USA; Department of Medicine, Yale University School of Medicine, New Haven, CT, USA; Bruce W. Carter Miami Veterans Affairs (VA) Medical Center, Miami, FL, USA; Department of Psychiatry, University of Miami Miller School of Medicine, Miami, FL, USA
GWAS.PC funding source(s)
Supported by the VA Office of Research and Development (Cooperative Studies Program #572 and Million Veteran Program #G002).

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