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HAllA specifications


Unique identifier OMICS_24559
Name HAllA
Alternative name Hierarchical All-against-All association
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Stability Stable
Numpy, Scipy, Scikit-learn, matplotlib, Pandas
Maintained Yes




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HAllA citations


Physicians, sick leave certificates, and patients' subsequent employment outcomes

PMCID: 5947550
PMID: 29573056
DOI: 10.1002/hec.3646

[…] by markussen, røed, røgeberg, and gaure () for norway., besides sorting, another important condition for my results to be valid is that the health status should be properly controlled for. similar to halla, mayr, pruckner, and garcía‐gómez (), i therefore restrict the sample to patients who have not been admitted to a hospital and who incur less than 330 euros of medical expenses on aggregate 2 ye […]


Individualized prediction of mortality using multiple inflammatory markers in patients on dialysis

PMCID: 5832435
PMID: 29494637
DOI: 10.1371/journal.pone.0193511

[…] hospital; the catholic university of korea, st. mary’s hospital; the catholic university of korea, st. vincent’s hospital; the catholic university of korea, uijeongbu st. mary’s hospital; cheju halla general hospital; chonbuk national university hospital; chonnam national university hospital; chung-ang university medical center; chungbuk national university hospital; chungnam national […]


Implementation of a Sustainable Training System for Emergency in Vietnam

PMCID: 5797645
PMID: 29441344
DOI: 10.3389/fpubh.2018.00004

[…] four sequential trainings (provider, pre-monitor, instructor, and post-monitor courses). the bls provider course was opened at three time points in october and also in december 2014 in korea at halla-stony emergency medicine education center (halla-stony emec) in cheju halla university, which is the official bls training site of kacpr and aha. any bls participant who passed the written […]


Improving Crop Yield and Nutrient Use Efficiency via Biofertilization—A Global Meta analysis

PMCID: 5770357
PMID: 29375594
DOI: 10.3389/fpls.2017.02204

[…] was calculated to a depth of 30 cm. soil available phosphorus was measured mostly with the method by olsen, but also with bray, mehlich, and ab dtpa. yet in many cases the method was not given. yli-halla () state that usually there is a rough agreement between the results obtained with different extraction methods in non-calcareous soils, but in calcareous soils the results of acidic and basic […]


Arthothelium punctatum (Arthoniaceae, Arthoniales), A New Lichen Species from South South Korea

PMCID: 5780357
PMID: 29371793
DOI: 10.5941/MYCO.2017.45.4.255

[…] prov., goheung county, bongnae township, singeum village, 34°28′16.05″ n, 127°28′06.07″ e, alt. 15m, on bark, 25 apr 2016, j. s. park & j.-j. woo, 160058 (kolri 038018); jeju prov., jeju, mt. halla, eoseungsaengak trail, 33°23′33.50″ n, 126°29′42.20″ e, alt. 973 m, on bark, 23 may 2016, j. s. park & s.-o. oh, 160122 (kolri 038257)., the authors thank dr. dalip k. upreti and dr. […]


Taxonomic Revision of the Lichen Genera Pertusaria, Varicellaria, and Variolaria (Pertusariales, Ascomycota) in South South Korea

PMCID: 5780359
PMID: 29371795
DOI: 10.5941/MYCO.2017.45.4.270

[…] acid instead of stictic acid. p. thwaitesii is also similar to p. pertusa but the latter has ascospores with smooth inner wall and prominent black ostioles., specimen examined: korea, jeju-do, mt. halla, 33°25′18.04′′ n, 126°32′58.09′′ e, alt. 577m, on bark, 1 aug 2012, s.-o. oh, u. jayalal, j. s. park, j.-s. hur 120946 (kolri 015976); jeju-do, mt. halla, 33°21′30.08′′ n, 126°30′13.09′′ e, […]

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