HALO specifications


Unique identifier OMICS_33575
Alternative name HALO Image analysis software
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Windows
License Commercial
Computer skills Medium
Stability Stable
Free trial Yes
Registration required Yes
Maintained Yes


No version available


  • person_outline Indica Labs Team

HALO citations


Targeting of NAT10 enhances healthspan in a mouse model of human accelerated aging syndrome

Nat Commun
PMCID: 5923383
PMID: 29703891
DOI: 10.1038/s41467-018-03770-3
call_split See protocol

[…] ification of ×200 (resolution of 0.45 μm per pixel). The skin (always the same region/the flanks) and aorta regions for analysis were identified by a pathologist (MJ) and manually annotated using the HALO image analysis software (Indica Labs). The cells inside these annotated regions were identified and counted using the HALO software CytoNuclear v1.5 algorithm, the output of cell density (cells/m […]


Treatment with the WNT5A mimicking peptide Foxy 5 effectively reduces the metastatic spread of WNT5A low prostate cancer cells in an orthotopic mouse model

PLoS One
PMCID: 5590932
PMID: 28886116
DOI: 10.1371/journal.pone.0184418

[…] atio between the number of Ki67-positive cells and the number of vimentin-positive cells, using the same software. CD44 membrane staining was quantified using the “membrane v1.1” algorithm within the Halo image analysis software (Indica Labs, Corrales, NM, USA). The relative number of vimentin, cleaved caspase-3, Ki67 and CD44 positive cells was calculated by dividing each value in the Foxy-5-trea […]

HALO institution(s)
Indica Labs, Corrales, NM, USA

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