HapCUT specifications

Information


Unique identifier OMICS_00198
Name HapCUT
Alternative name HASH (Haplotype Assembly for Single Human)
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some reads aligned to a reference genome.
Input format BAM, VCF
Operating system Unix/Linux
Programming languages C, C++, Perl, Python
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Vikas Bansal <>
  • person_outline Vikas Bansal <>

Additional information


https://sites.google.com/site/vibansal/software/hapcut/

Publications for HapCUT

HapCUT institution(s)
Department of Computer Science and Engineering, University of California, San Diego, CA, USA

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