HAPGEN specifications

Information


Unique identifier OMICS_04379
Name HAPGEN
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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HAPGEN article

HAPGEN citation

2015
PMCID: 4583479

[…] causal variants in a region, 1000 regions containing two distinct variants (ceu r 2<0.05) with a maf~10% in the central 750kb of the 1mb interval were selected. haplotypes were simulated using hapgen2 with, with each of the two variants assigned an additive phenotypic effect (or = 1.2). for each raf/or parameter setting, genotypes were generated for ten “studies” of 1,000 cases and 1,000 […]

HAPGEN institution(s)
Wellcome Trust Centre for Human Genetics, Oxford, UK

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