The determination of human mitochondrial DNA (mtDNA) haplogroups is not only crucial in anthropological and forensic studies, but is also helpful in the medical field to prevent establishment of wrong disease associations. In recent years, high-throughput technologies and the…
Human Mitochondrial… Human Mitochondrial Database

HmtDB Human Mitochondrial Database

Supports population genetics and mitochondrial disease studies. HmtDB hosts…

Supports population genetics and mitochondrial disease studies. HmtDB hosts human mitochondrial genome sequences annotated with population and variability data, the latter being estimated through the…

Desktop app
mtDNAoffice mtDNAoffice

mtDNAoffice

A fast, automated process to determine distances between mtDNA sequences…

A fast, automated process to determine distances between mtDNA sequences allowing their subsequent clustering and haplogroup assignment that may increase the speed of data analysis and avoid human…

Desktop app
H-mito H-mito

H-mito

A mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree.

A mitochondrial DNA haplogroup prediction tool based on the phylogenetic tree.

Web app
HAPLOFIND HAPLOFIND

HAPLOFIND

A pipeline based on previous algorithms, inherited from the "nuclear…

A pipeline based on previous algorithms, inherited from the "nuclear genomic toolbox," combined with a developed algorithm capable of efficiently and easily classify new mtDNA sequences…

Web app
HaploGrep HaploGrep

HaploGrep

A fast, reliable and straight-forward algorithm implemented in a web…

A fast, reliable and straight-forward algorithm implemented in a web application to determine the haplogroup affiliation of thousands of mitochondrial DNA (mtDNA) profiles genotyped for the entire…

Web app
MitoTool MitoTool

MitoTool

Provides a convenient, user-friendly interface for handling human mtDNA…

Provides a convenient, user-friendly interface for handling human mtDNA sequence data. It contains multiple modules which cover a wide array of functions: (i) to automatically yield a list of the…

Desktop app
Phy-Mer Phy-Mer

Phy-Mer

A mitochondrial genome haplogroup-defining algorithm using a k-mer approach.…

A mitochondrial genome haplogroup-defining algorithm using a k-mer approach. Phy-Mer performs equally well as the leading haplogroup classifier, HaploGrep, while avoiding the errors that may occur…

MitoVariome Deprecated MitoVariome

MitoVariome

A freely accessible web application and database that enables human…

A freely accessible web application and database that enables human mitochondrial genome researchers to study genetic variation in mitochondrial genome with textual and graphical views accompanied by…

Curators for Haplogroup prediction

  • Hélène Dauchel's avatar image
    Hélène Dauchel
    LITIS EA 4108 Computer science,…

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.