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HaploPainter

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A pedigree-drawing application with special features for easy visualization of complex haplotype information. HaploPainter has been developed to facilitate gene mapping in mendelian diseases in terms of fast and reliable definition of the smallest critical interval harbouring the underlying gene defect. Features like haplotype compression and the ability of marker section cut-out are particularly helpful for viewing large SNP-derived haplotypes.

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HaploPainter classification

HaploPainter specifications

Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Requirements:
GTK+, Cairo, Glib
Interface:
Command line interface
Input format:
pedigree, haplotypes, map file
Programming languages:
Perl
Stability:
Stable
Maintained:
Yes

HaploPainter distribution

versioning

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No versioning.

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HaploPainter support

Documentation

Maintainer

  • Holger Thiele <>

Credits

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Publications

Institution(s)

Gene Mapping Center, Max Delbrueck Center (MDC) for Molecular Medicine Berlin-Buch, Berlin, Germany; Institute of Medical Genetics, University Medicine of Berlin, Berlin, Germany; Cologne Center for Genomics (CCG), University of Cologne, Cologne, Germany

Funding source(s)

This work was funded by the Federal Ministry of Science and Education of Germany through the National Genome Research Network.

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