HAPSIMU statistics

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Associated diseases

Associated diseases

HAPSIMU specifications

Information


Unique identifier OMICS_15328
Name HAPSIMU
Software type Package/Module
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Windows
Programming languages C++
Computer skills Medium
Version 1.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Hong-Wen Deng <>

Publication for HAPSIMU

HAPSIMU in publications

 (2)
PMCID: 3033325
PMID: 21226914
DOI: 10.1186/1471-2105-12-16

[…] u.s. residents of northern and western european ancestry (ceu) http://hapmap.ncbi.nlm.nih.gov/. five sequences showing variable ld degrees (median(r2)) ranging from 0.007 to 0.5 were generated., hapsimu http://l.web.umkc.edu/liujian/ was used to simulate genotypes with simulation parameters described in additional file . three sample sizes were chosen with respect to the number of observed […]

PMCID: 2800123
PMID: 20003414
DOI: 10.1186/1471-2105-10-415

[…] its respective ranking in association tests after bonferroni corrections., to assess the effects of normalization, genotype data was generated from a disease model with one causal snp allele using hapsimu []. for each sample size and genetic effect, 120 datasets were generated. the average minor allele frequency (maf) for the causal snp was 0.077. four traits, 4 transformations, 4 samples […]


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HAPSIMU institution(s)
Institute of Molecular Genetics, School of Life Science and Technology, XI'an Jiaotong University, XI'an, Popular China; Departments of Orthopedic Surgery and Basic Medical Science, School of Medicine, University of Missouri-Kansas City, Kansas City, MO, USA; Department of Mathematics and Statistics, University of Missouri-Kansas City, Kansas City, MO, USA; Laboratory of Molecular and Statistical Genetics, College of Life Sciences, Hunan Normal University, Changsha, Hunan, Popular China
HAPSIMU funding source(s)
The study was partially supported by Xi'an Jiaotong University; by the Ministry of Education of China, NIH (R01 AR050496, R21 AG 027110, R01 AG026564 and P50 AR055081), National Science Foundation of China, Huo Ying Dong Education Foundation and Hunan Province.

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