Harmony statistics

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Associated diseases

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Harmony specifications

Information


Unique identifier OMICS_17105
Name Harmony
Interface Web user interface
Restrictions to use None
Input data The query protein structure and the alignment file.
Input format PDB and PIR or fasta.
Output data Detection of gross error, detection of local error, Molscript image and Rasmol view.
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Ramanathan Sowdhamini <>

Publication for Harmony

Harmony in publications

 (2)
PMCID: 5571608
PMID: 28836963
DOI: 10.1186/s12864-017-4045-3

[…] are 69% and 70% identical to the template, respectively. twenty models were generated for each of the active and inactive rnase ph monomers and validated using procheck [], verify3d [], prosa [] and harmony []. the best model for each of the active and inactive rnase ph monomers were selected on the basis of discrete optimized protein energy (dope) score and other validation parameters obtained […]

PMCID: 3458555
PMID: 22735705
DOI: 10.1093/nar/gks611

[…] models, and the model with lowest energy was selected as a final model for further analysis. to assess the quality of the model to check whether the model has any local or global error, we utilized harmony server, which assesses the compatibility of an amino acid sequence with a proposed three-dimensional structure ()., we employed two steps to create zfp206scan–zfp110scan heterodimer. […]


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Harmony institution(s)
National Centre for Biological Sciences (TIFR), GKVK Campus, Bellary Road Bangalore, India; Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India

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