HARP specifications

Information


Unique identifier OMICS_29733
Name HARP
Alternative name Haplotype-Assisted Read Parsing
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License MIT License
Computer skills Advanced
Stability Stable
Requirements
bowtie2, samtools, gawk, GNU coreutils
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline David Gilbert
  • person_outline Daniel Vera

Publication for Haplotype-Assisted Read Parsing

HARP institution(s)
Department of Biological Science, Florida State University, Tallahassee, FL, USA; The Babraham Institute, Babraham Research Campus, Cambridge, UK; Center for Genomics and Personalized Medicine, Florida State University, Tallahassee, FL, USA; Department of Reproduction and Development, Erasmus MC, University Medical Center, Rotterdam, The Netherlands
HARP funding source(s)
Supported by NIH grants GM083337 and DK107965.

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