HeatmapGenerator statistics

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Associated diseases

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HeatmapGenerator specifications

Information


Unique identifier OMICS_07025
Name HeatmapGenerator
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Mac OS, Windows
Programming languages C++, R
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Bohdan B. Khomtchouk <>

Publication for HeatmapGenerator

HeatmapGenerator in publications

 (2)
PMCID: 5736797
PMID: 29109175
DOI: 10.1128/IAI.00612-17

[…] with bonferroni corrections for multiple comparisons were performed using graphpad prism 7.0. the tn-seq circos plot () was generated using circos 0.67-7 (). heat map data for were generated using heatmapgenerator 5.0 (). gene set enrichment analysis for the data in was performed with genome2d ()., rna-seq reads are available under geo accession number gse98398. tn-seq reads are available […]

PMCID: 5414340
PMID: 28464921
DOI: 10.1186/s13287-017-0562-x

[…] analysis was performed following the 2–δδct livak method []. normalization was performed using rpl13a and actb housekeeping genes. hierarchical clustering analysis was performed by applying heatmapgenerator 5 software []. values were reported as mean of normalized fold expression ± sem. statistical analysis was carried out by two-tailed t test applying the mann–whitney test., freshly […]


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HeatmapGenerator institution(s)
Center for Therapeutic Innovation and Department of Psychiatry and Behavioral Sciences, University of Miami Miller School of Medicine, Miami, FL, USA; John P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, FL, USA
HeatmapGenerator funding source(s)
Supported by the Department of Defense (DoD) through the National Defense Science & Engineering Graduate Fellowship (NDSEG) Program.

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