HemI pipeline

HemI specifications

Information


Unique identifier OMICS_18600
Name HemI
Alternative name Heat map Illustrator
Software type Package/Module
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input data Some gene or protein expression data.
Input format XLS, CSV, TSV
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Version 1.0.1
Stability Stable
Source code URL http://hemi.biocuckoo.org/down.php
Maintained Yes

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Maintainer


  • person_outline Yu Xue <>

Additional information


Manual: http://hemi.biocuckoo.org/faq.php

Publication for Heat map Illustrator

HemI citation

2016
PMCID: 5133881

[…] set as the thresholds for significantly different gene expression between the two samples. the heat maps showing expression profiles were generated based on the log10 (fpkm + 1) values using hemi (heat map illustrator) with the default values [39]., a phylogenetic tree of selected r2r3-myb transcription factors was constructed using mega 5 software by the neighbor-joining method with bootstrap […]

HemI institution(s)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China
HemI funding source(s)
Supported, in whole or in part, by the National Basic Research Program (973 project) (2012CB910101, and 2013CB9339002), Natural Science Foundation of China (31171263, 81272578 and J1103514), International Science & Technology Cooperation Program of China (2014DFB30020), China Postdoctoral Science Foundation (2014M550392), and Fundamental Research Funds for the Central Universities (HUST: 2013TS080, 2014YQ003).

HemI review

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王江浩

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HUST Prof. Xue Yu's work