Hi.C specifications

Information


Unique identifier OMICS_20578
Name Hi.C
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained Yes

Download


download.png
github.png

Versioning


No version available

Maintainer


  • person_outline Eduard Zorita

Hi.C citation

library_books

Parallel sequencing lives, or what makes large sequencing projects successful

2017
GigaScience
PMCID: 5714127
PMID: 29048533
DOI: 10.1093/gigascience/gix100

[…] for instance, the human origin of b1913e6c1_51720e9cf was needed to determine hg38 as the reference genome sequence to which reads would be aligned, and the restriction enzyme “DpnII” applied in the Hi-C protocol was used in the mapping too. Other metadata were used for quality control (e.g., sequencing facility and/or date for detecting batch effects or rescuing swapped samples using the correct […]

Hi.C reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Hi.C