HiCExplorer specifications


Unique identifier OMICS_16745
Name HiCExplorer
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Thomas Manke <>

Publications for HiCExplorer

HiCExplorer institution(s)
Max Planck Institute of Immunobiology and Epigenetics, Bioinformatics Unit, Freiburg, Germany; Max Planck Institute of Biochemistry, Computational Biology, Martinsried, Germany; Max Planck Institute of Immunobiology and Epigenetics, Sequencing Facility, Freiburg, Germany; University of Freiburg, Department of Computer Science, Freiburg, Germany; Faculty of Biology, University of Freiburg, Freiburg, Germany
HiCExplorer funding source(s)
This work was supported by the German Research Foundation [SFB 992, Project Z01] and a grant from the Federal Ministry of Education and Research through the German Epigenome Programme DEEP [01KU1216G].

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