hiclipr specifications

Unique identifier:
OMICS_16327
Interface:
Command line interface
Input data:
Ensure that the executable files are named ‘bowtie’, ‘samtools’, ‘sambamba’, ‘cutadapt’, and ‘RNAhybrid’.
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS
License:
GNU General Public License version 3.0
Version:
0.3.1
Requirements:
Bowtie, Samtools, Sambamba, Cutadapt, RNAhybrid
  • Animals
    • Homo sapiens

versioning

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hiclipr distribution

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hiclipr support

Documentation

Maintainer

  • Anob Chakrabarti <>

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Credits

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Publications

Funding source(s)

The project was supported by funding from the European Research Council (617837-Translate), the Wellcome Trust Joint Investigator Award (103760/Z/14/Z), the Nakajima Foundation Fellowship, MRC Centenary Early Career Award, Wellcome Trust PhD Training Fellowship for Clinicians, and the Francis Crick Institute, which receives its core funding from Cancer Research UK (FC001002), the UK Medical Research Council (FC001002), and the Wellcome Trust (FC001002).

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