HAMR specifications

Unique identifier:
OMICS_10437
Software type:
Package/Module
Restrictions to use:
None
Output data:
It produces a table of genome coordinates and nucleotide frequencies at those coordinates.
Computer skills:
Advanced
Stability:
Stable
Name:
High-throughput Annotation of Modified Ribonucleotides
Interface:
Command line interface
Input data:
A sequence-read alignment in BAM format (consisting of uniquely mapped reads).
Operating system:
Unix/Linux
Version:
1.2.0
Maintained:
Yes

versioning

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HAMR distribution

download

HAMR specifications

Unique identifier:
OMICS_10437
Interface:
Web user interface
Input data:
A sequence-read alignment in BAM format (consisting of uniquely mapped reads).
Computer skills:
Basic
Stability:
Stable
Name:
High-throughput Annotation of Modified Ribonucleotides
Restrictions to use:
None
Output data:
It produces a table of genome coordinates and nucleotide frequencies at those coordinates.
Version:
1.2.0
Maintained:
Yes

HAMR support

Maintainer

  • Li-San Wang <>
  • Li-San Wang <>

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Credits

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Publications

Institution(s)

Genomics and Computational Biology Graduate Group, University of Pennsylvania, Philadelphia, PA, USA

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