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|Alternative name||Human Interactome Map|
|Restrictions to use||None|
- Homo sapiens
Publication for Human Interactome Map
Comprehensive data resources and analytical tools for pathological association of aminoacyl tRNA synthetases with cancer
[…] PPIs based on paralog- and ortholog-based PPI prediction and text mining from STRING, BIND, interologous interaction database (I2D) (), online predicted human interaction database (), human PPI map (HiMAP) () and human PPI prediction (). In addition, the resources that integrate PPIs in individual interactome databases, such as PSICQUIC (EBI) () and NCBI PPI databases, were also used. On the basi […]
IDDI: integrated domain domain interaction and protein interaction analysis system
[…] To construct a new comprehensive DDI database, we merged three 3D structure-based DDI datasets and twenty predicted DDI datasets based on the Pfam identifier. Since the datasets, including P-value, HiMAP, DomainGA and Top-down, use SCOP and InterPro identifier, we converted the SCOP domains to Pfam using SGD http://www.yeastgenome.org and the InterPro domains to Pfam using a mapping table in Int […]
Novel search method for the discovery of functional relationships
[…] main architectures from Pfam () and InterPro (); metabolic and signaling pathways from HumanCyc (), KEGG (), and Reactome (); protein–protein interactions and protein complexes from CORUM (), DIP (), HiMAP (), HPRD (), IntAct (), MINT (), PDB (; ) and STRING (); disease associations from OMIM (); enzyme classifications from the Enzyme nomenclature database (); gene expression data for different ti […]
Identification of Functional Networks of Estrogen and c Myc Responsive Genes and Their Relationship to Response to Tamoxifen Therapy in Breast Cancer
[…] current in November 2005. Pathway analysis used Onto-Express (http://vortex.cs.wayne.edu/index.htm, ), Ingenuity Pathways Analysis (Ingenuity Systems, Redwood City, CA, http://www.ingenuity.com), and HiMAP (www.himap.org . Gene ontology and functional annotation is presented for only those categories containing ≥3 genes and with an adjusted P value <0.01. […]
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