histoCAT specifications


Unique identifier OMICS_16078
Name histoCAT
Alternative names HIStology TOpography Cytometry Analysis Toolbox, miCAT(multiplexed image Cytometry Analysis Toolbox)
Interface Web user interface
Restrictions to use None
Programming languages MATLAB
Computer skills Basic
Stability Stable
Maintained Yes


  • Primates
    • Homo sapiens


  • person_outline Bernd Bodenmiller <>

Additional information


Publication for HIStology TOpography Cytometry Analysis Toolbox

histoCAT funding source(s)
This work was supported by the Swiss National Science Foundation (SNSF) R’Equip grant 316030-139220, a SNSF Assistant Professorship grant PP00P3-144874, a Swiss Cancer League grant, the PhosphonetPPM SystemsX grant, and funding from the European Research Council (ERC) under the European Union's Seventh Framework Programme (FP/2007-2013)/ERC Grant Agreement n. 336921, the Forschungskredit of the University of Zurich, grant FK-74419-01-01 and by the European Molecular Biology Organization (EMBO) Long Term Fellowships co-funded by the European Commision (LTFCOFUND2013 and 2014), grants ALTF-711 2015 and ALTF-970 2014.

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