HLA-VBSeq specifications


Unique identifier OMICS_10903
Name HLA-VBSeq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Read data (FASTQ), or read data aligned to GRCh37/hg19 in BAM format
Input format FASTQ, BAM
Output data HLA types estimated from sequencing data
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes


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HLA-VBSeq article

HLA-VBSeq institution(s)
Department of Integrative Genomics, Tohoku Medical Megabank Organization, Tohoku University, Aoba-ku, Sendai, Miyagi, Japan
HLA-VBSeq funding source(s)
This work was supported (in part) by MEXT Tohoku Medical Megabank Project.

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