HLAssign specifications


Unique identifier OMICS_07692
Name HLAssign
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages C, C++
Computer skills Advanced
Stability Stable
Maintained Yes


No version available

Publication for HLAssign

HLAssign citation


Accuracy of Programs for the Determination of Human Leukocyte Antigen Alleles from Next Generation Sequencing Data

Front Immunol
PMCID: 5733459
PMID: 29326702
DOI: 10.3389/fimmu.2017.01815

[…] We tested four publicly available programs (HLAssign, HLAreporter, ATHLATES, and Optitype) and one commercial (Omixon Target) program package for their accuracy in the interpretation of HLA alleles based on genomic NGS sequence data. Two datase […]

HLAssign institution(s)
Christian-Albrechts-University of Kiel, Institute of Clinical Molecular Biology, Kiel, Germany

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