HINT specifications
- Unique identifier:
- OMICS_11372
- Software type:
- Framework/Library
- Restrictions to use:
- None
- Computer skills:
- Advanced
- Maintained:
- Yes
- Name:
- Hmm-based IdeNtification of Tf footprints
- Interface:
- Command line interface
- Operating system:
- Unix/Linux
- Stability:
- Stable
Subtools
- Regulatory Genomics Toolbox
versioning
No versioning.
HINT support
Maintainer
- Eduardo Gusmao <>
forum
No open topic.
Credits
Publications
-
(Gusmao et al., 2014)
Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications.
Bioinformatics.
PMID: 25086003
Institution(s)
IZKF Computational Biology Research Group, Institute for Biomedical Engineering, RWTH Aachen University Medical School, Aachen, Germany; Computational RNA Biology Lab and Bioinformatics Core, Max Planck Institute for Biology of Ageing, Cologne, Germany; Department of Cell Biology, Institute for Biomedical Engineering, RWTH Aachen University Medical School, Aachen, Germany; Helmholtz Institute for Biomedical Engineering, RWTH Aachen University Medical School, Aachen, Germany; Aachen Institute for Advanced Study in Computational Engineering Science (AICES), RWTH Aachen University, Aachen, Germany; Center of Informatics, Federal University of Pernambuco, Recife, Brazil
Funding source(s)
Interdisciplinary Center for Clinical Research (IZKF Aachen), RWTH Aachen University Medical School, Aachen, Germany; and Brazilian research agencies: FACEPE and CNPq
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