HomeoSplitter statistics

info info

Citations per year

info

Popular tool citations

chevron_left Allopolyploidy analysis chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

HomeoSplitter specifications

Information


Unique identifier OMICS_07406
Name HomeoSplitter
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Version 1.01
Stability Stable
Maintained Yes

Versioning


No version available

Publication for HomeoSplitter

HomeoSplitter citations

 (2)
library_books

Patterns of alternative splicing vary between species during heat stress

2018
PMCID: 5846289
PMID: 29564081
DOI: 10.1093/aobpla/ply013

[…] independent heat stress and control rna-seq libraries and assembled using trinity () and was annotated using annocript (). since b. depauperata is a polyploid, we disentangled the homologs using homeosplitter (). when we used the b. depauperata transcriptome as reference, ~100185 junctions were identified. boechera stricta is a close relative of b. depauperata for which a complete genome […]

library_books

Genotyping by Sequencing Using Specific Allelic Capture to Build a High Density Genetic Map of Durum Wheat

2016
PMCID: 4865223
PMID: 27171472
DOI: 10.1371/journal.pone.0154609

[…] of the transcriptome (dwr) composed of 80,691 contigs was available from a past study [] (). briefly, rnas of 172 lines of an evolutionary pre-breeding population (epo) were sequenced and assembled. homeosplitter software (http://bioweb.supagro.inra.fr/homeosplitter) was applied on this de novo assembly to unravel homeologous copies that were initially erroneously merged in a single chimeric […]


Want to access the full list of citations?

HomeoSplitter reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review HomeoSplitter