HopLand specifications


Unique identifier OMICS_23589
Name HopLand
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Jie Zheng <>

Publication for HopLand

HopLand in publications

PMCID: 5612965
PMID: 28947798
DOI: 10.1038/s41598-017-12047-6

[…] from 2011–2014 to explore their viral and bacterial diversity and to detect both known and potential tick-borne pathogens afflicting humans., ticks were collected at the university of california hopland research and extension center (hrec) in northwestern california, usa. the hrec is a 5,358-acre, multi-purpose agricultural sciences research facility located on the western slopes […]

PMCID: 5207655
PMID: 28046090
DOI: 10.1371/journal.pone.0169328

[…] demographic response of a. triuncialis to the interaction of simulated climate change and conspecific spatial patterns., we established a three-year field experiment at the university of california hopland research and extension center (mendocino county, ca; 39°00'58” n, 123°03'47” w). the study location was at 880 m elevation. soils in the experimental area are deep and well-drained, with clay […]

PMCID: 5051964
PMID: 27706171
DOI: 10.1371/journal.pntd.0005020

[…] from which they were collected (a-leaf litter; b-log; c-tree trunk; d-rock)., focused collection of d. occidentalis nymphs was also conducted in mendocino county the university of california, hopland research and extension center (hrec) (39.0009,-123.0829) where r. philipii was isolated from ticks in the early 1970s [] and antibodies for sfg rickettsiae were detected in rodents […]

PMCID: 5606591
PMID: 29056734
DOI: 10.3390/vetsci3040026

[…] on data from particular geographical locations, either because active researchers focused their attention on particular sites or these sites appeared to be “hotspots” for infection, for example hopland field station and hendy woods state park in mendocino county. valuable data could be compiled if larger, systematic surveys were conducted of more species, over wider and possibly randomly […]

PMCID: 5315480
PMID: 27420027
DOI: 10.1038/ismej.2016.88

[…] cleanly by soil type or geographic separation: averaged over multiple structure runs, the minority structure subgroup contains five fully assigned strains from serpentine soil from jasper ridge and hopland and one 92.8% assigned strain from non-serpentine soil from jasper ridge. other strains contained 0.011–38.0% of the minority cluster (). nonparametric analysis of variance revealed […]

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HopLand institution(s)
Biomedical Informatics Laboratory, School of Computer Science and Engineering, Nanyang Technological University, Singapore, Singapore; Bioinformatics Institute, Agency for Science, Technology, and Research (A*STAR), Singapore, Singapore; Genome Institute of Singapore, Agency for Science, Technology, and Research (A*STAR), Singapore, Singapore; Complexity Institute, Nanyang Technological University, Singapore 637723, Singapore
HopLand funding source(s)
Supported by the MOE AcRF Tier 1 grant (RG120/15, 2015-T1-002-094), Ministry of Education, Singapore, and the PhD scholarship from NTU Provost office for the SCE-BII joint PhD program.

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