Hopper specifications

Information


Unique identifier OMICS_15091
Name Hopper
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
Database management system MySQL
Computer skills Medium
Stability No
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for Hopper

Hopper citation

library_books

MAGIC SPP: a database driven DNA sequence processing package with associated management tools

2006
BMC Bioinformatics
PMCID: 1421442
PMID: 16522212
DOI: 10.1186/1471-2105-7-115

[…] nly high-quality reads proceed to later stages of data analysis []. Sequence processing tools have also been developed as part of more comprehensive packages, including the Staden Package [], MTT [], Hopper [], Gasp [], and MGI []. These packages typically include additional functionalities such as clustering and annotation. Recently, packages have also been developed specifically for working with […]

Hopper institution(s)
Department of Molecular Biotechnology, University of Washington, Seattle, WA, USA
Hopper funding source(s)
Supported by the Human Genome Distinguished Postdoctoral Fellowships, the US Department of Energy, the Office of Health and Environmental Research and the Oak Ridge Institute for Science and Education.

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