Host-pathogen interaction network databases | Pathway analysis
Identification and analysis of host–pathogen interactions (HPI) is essential to study infectious diseases. However, HPI data are sparse in existing molecular interaction databases, especially for agricultural host–pathogen systems. Therefore, resources that annotate,…
PHI-base
Data

PHI-base Pathogen-Host Interactions database

Catalogues experimentally verified pathogenicity, virulence and effector genes…

Catalogues experimentally verified pathogenicity, virulence and effector genes from fungal, Oomycete and bacterial pathogens, which infect animal, plant, fungal and insect hosts. PHI-base contains…

VirusMentha
Data

VirusMentha

A virus-virus and virus-host interaction resource build on the detailed…

A virus-virus and virus-host interaction resource build on the detailed curation protocols of the IMEx consortium and on the integration strategies developed for mentha. VirusMentha is regularly and…

HIV-1, Human Protein Interaction Database
Data
VirHostNet
Data

VirHostNet Virus-Host Network

A public knowledge base specialized in the management and analysis of…

A public knowledge base specialized in the management and analysis of integrated virus-virus, virus-host and host-host interaction networks coupled to their functional annotations. VirHostNet will…

HoPaCI-DB
Data

HoPaCI-DB Host-Pseudomonas and Coxiella Interaction DataBase

A manually curated database of interactions between host-pathogen-related…

A manually curated database of interactions between host-pathogen-related elements such as biomolecules (proteins, metabolites etc.) and other factors (biological processes, cellular components…

A.thaliana…
Data

A.thaliana miRNA-XCC pathogen Pathways

Plants are continuously subjected to infection by pathogens, including bacteria…

Plants are continuously subjected to infection by pathogens, including bacteria and viruses. This present work is probably the first comprehensive study of constructing pathways that comprises…

HPIDB
Data

HPIDB

Facilitates both the identification and functional analysis of host–pathogen…

Facilitates both the identification and functional analysis of host–pathogen interactions (HPI) for a broad range of pathogens and their hosts. HPIDB 2.0 provides targeted curation, integration…

PPIRA
Data
Host pathogen…
Data

Host pathogen interactomes

Hosts pathogens implicated in many human diseases, like Herpes simplex and…

Hosts pathogens implicated in many human diseases, like Herpes simplex and Alzheimer's disease, the Epstein-Barr virus and multiple sclerosis or Chlamydia pneumoniae and atherosclerosis. The…

hpvPDB
Data

hpvPDB Human papillomavirus Proteome DataBase

Domiciles proteomic and genomic information on 150 HPV strains sequenced to…

Domiciles proteomic and genomic information on 150 HPV strains sequenced to date. Retreival of such vast information from different resources with a provision of prediction and validation of proteins…

EHFPI
Data

EHFPI Essential Host Factors for Pathogenic Infection

A database of Essential Host Factors (EHFs) for Pathogenic Infections. This…

A database of Essential Host Factors (EHFs) for Pathogenic Infections. This database focuses on the collection and functional analysis of a specialized class of host cellular genes identified from…

VirusMINT
Data

VirusMINT

Aims at collecting and annotating in a structured format all the interactions…

Aims at collecting and annotating in a structured format all the interactions between human and viral proteins and to integrate this information in the human protein interaction network. The curation…

MPID
Data

MPID Magnaporthe grisea Protein-protein Interaction Database

A database of predicted protein-protein interaction network in rice blast…

A database of predicted protein-protein interaction network in rice blast fungus. It is hoped that MPID will provide new hints as to the functional genomics of this fungus.

XooNET
Data

XooNET

An open and free public database server for protein interaction information for…

An open and free public database server for protein interaction information for Xanthomonas oryzae pathovar oryzae (Xoo). It contains 4,538 proteins and 26,932 possible interactions consisting of…

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