HotSPRing specifications

Information


Unique identifier OMICS_10200
Name Hot Spot at Protein-RNA interacing surface
Interface Web user interface
Restrictions to use None
Input data A protein–RNA complex file in PDB format, and their respective chain identifiers along with the structural homologs derived from the HSSP alignment. The unbound conformation of the protein is also expected but is not mandatory.
Output data The program generates a single output file named “PDBid.pred” (example 1dfu.pred) consisting the list of the interface protein residues of the submitted protein-RNA complex.
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Naga Bhusha Rao Karampudi <>

HotSPRing article

HotSPRing institution(s)
Computational Structural Biology Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, India; Advanced Technology Development Centre, Indian Institute of Technology Kharagpur, Kharagpur, India

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