HotSPRing specifications

Unique identifier:
OMICS_10200
Interface:
Web user interface
Input data:
A protein–RNA complex file in PDB format, and their respective chain identifiers along with the structural homologs derived from the HSSP alignment. The unbound conformation of the protein is also expected but is not mandatory.
Computer skills:
Basic
Maintained:
Yes
Name:
Hot Spot at Protein-RNA interacing surface
Restrictions to use:
None
Output data:
The program generates a single output file named “PDBid.pred” (example 1dfu.pred) consisting the list of the interface protein residues of the submitted protein-RNA complex.
Stability:
Stable

HotSPRing support

Maintainer

  • Naga Bhusha Rao Karampudi <>

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Publications

Institution(s)

Computational Structural Biology Laboratory, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, India; Advanced Technology Development Centre, Indian Institute of Technology Kharagpur, Kharagpur, India

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