Hotpep specifications

Information


Unique identifier OMICS_17113
Name Hotpep
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A text file with predicted protein sequences (for annotation).
Input format Fasta
Output data One directory for each enzyme class in the CAZy database, a file containing a summary of the results and a file with all the families found for each accession number. Each of the class directories contains files with the hits for each family, a summary and a directory with functional predictions. The folder with functional predictions contains files for each EC number found and a summary.
Operating system Windows
Programming languages Ruby
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Pete Busk <>

Publication for Hotpep

Hotpep institution(s)
Department of Chemical and Biochemical Engineering, Technical University of Denmark, Soltofts Plads, Lyngby, Denmark
Hotpep funding source(s)
Supported by project number Mar 14319 from Nordic Innovation, SYNFERON – from the Danish Innovation Fund and by The Villum Foundation.

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