Hotpep specifications

Unique identifier:
OMICS_17113
Interface:
Command line interface
Input data:
A text file with predicted protein sequences (for annotation).
Output data:
One directory for each enzyme class in the CAZy database, a file containing a summary of the results and a file with all the families found for each accession number. Each of the class directories contains files with the hits for each family, a summary and a directory with functional predictions. The folder with functional predictions contains files for each EC number found and a summary.
Programming languages:
Ruby
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Input format:
Fasta
Operating system:
Windows
Computer skills:
Advanced
Maintained:
Yes

versioning

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Hotpep distribution

download

Hotpep support

Documentation

Maintainer

  • Pete Busk <>

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Credits

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Publications

Institution(s)

Department of Chemical and Biochemical Engineering, Technical University of Denmark, Soltofts Plads, Lyngby, Denmark

Funding source(s)

Supported by project number Mar 14319 from Nordic Innovation, SYNFERON – from the Danish Innovation Fund and by The Villum Foundation.

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