Hotspot Hunter specifications

Unique identifier:
OMICS_11283
Restrictions to use:
None
Computer skills:
Basic
Maintained:
No
Interface:
Web user interface
Input data:
Users can predict hotspots from a single protein sequence, or from a set of aligned protein sequences representing pathogen proteome. The latter feature provides a global view of the localizations of the hotspots in the proteome set, enabling analysis of antigenic diversity and shift of hotspots across protein variants.

Hotspot Hunter support

Maintainer

This tool is not available anymore.

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Publications

Institution(s)

Institute for Infocomm Research, Singapore; School of Computer Engineering, Nanyang Technological University, Singapore; Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Pharmacology and Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, MD, USA; Product Evaluation and Registration Division, Centre for Drug Administration, Health Sciences Authority, Singapore; Cancer Vaccine Center, Dana-Farber Cancer Institute, Boston, MA, USA; School of Land, Crop, and Food Sciences, University of Queensland, Brisbame, Australia

Funding source(s)

This project has been funded in part with Federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, USA, under Grant No. 5 U19 AI56541 and Contract No. HHSN2662-00400085C; and the ImmunoGrid project under the EC contract FP6-2004-IST-4, No. 028069.

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