HPG pore statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left File format conversion chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

HPG pore specifications

Information


Unique identifier OMICS_11235
Name HPG pore
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input format FAST5
Output format FASTQ/FASTA
Biological technology Oxford Nanopore
Operating system Unix/Linux
Programming languages Java
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements
Maven, gcc, zlib, Hadoop
High performance computing Yes
Maintained Yes

Versioning


Add your version

Documentation


Maintainer


  • person_outline Joaquin Tarraga <>

Publication for HPG pore

HPG pore institution(s)
Computational Genomics Department, Centro de Investigación Príncipe Felipe (CIPF), Valencia, Spain; Departamento de Informática, ETSE, Universidad de Valencia, Valencia, Spain; HPC Service, University Information Services, University of Cambridge, Cambridge, UK; Bioinformatics of Rare Diseases (BIER), CIBER de Enfermedades Raras (CIBERER), Valencia, Spain; Functional Genomics Node, (INB) at CIPF, Valencia, Spain
HPG pore funding source(s)
This work was supported by grants BIO2014-57291-R from the Spanish Ministry of Economy and Competitiveness (MINECO) and Plataforma de Recursos Biomoleculares y Bioinformáticos PT 13/0001/0030 from the ISCIII, both co-funded with European Regional Development Funds (ERDF), and PROMETEOII/2014/025 from the Conselleria de Educacio of the Valencian Community, FP7-PEOPLE-2012-ITN MLPM2012 318861 from the EU FP7.

HPG pore reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review HPG pore