HpQTL specifications


Unique identifier OMICS_17552
Name HpQTL
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 0.5
Stability Stable
Maintained Yes




No version available


  • person_outline Rongling Wu

Publication for HpQTL

HpQTL citation


Using haplotypes for the prediction of allelic identity to fine map QTL: characterization and properties

PMCID: 4223544
PMID: 25022866
DOI: 10.1186/1297-9686-46-45

[…] p 2 1 − ∑ p = 1 K f i , h p QTL 2 1 − ∑ l = 1 2 f a l 2 = D i , QTL 2 H i . H QTL where Hi=1−∑p=1Kfi,hpQTL2 and HQTL=1−∑l=12fal2 are the Hardy-Weinberg heterozygosities at i and the QTL respectively and Di,QTL2=2∑p=1KΔp2. Ri,QTL and Di,QTL2 are expected to increase as the tested position i gets close […]

HpQTL institution(s)
Ornamental Genetics, Beijing Key Laboratory of Ornamental Plants Germplasm Innovation, Beijing, China; Molecular Breeding, National Engineering Research Center for Floriculture at Beijing Forestry University, Beijing, China; Computational Genetics in the Center for Computational Biology at Beijing Forestry University, Beijing, China; Statistical Genetics in the Department of Public Health Sciences at Pennsylvania State University, Hershey, PA, USA
HpQTL funding source(s)
The Beijing Nova program (grant number Z161100004916074), the Medium and Long Scientific Research Project for Young Teachers in Beijing Forestry University (grant number 2016ZCQ02), National Natural Science Foundation of China (grant number 31401900), Special Fund for Forest Scientific Research in the Public Welfare (grant number 201404102) and ‘One-thousand Person Plan’ Award.

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