HSA specifications

Unique identifier:
OMICS_11394
Interface:
Command line interface
Input data:
The input for HSA can be either raw contact maps with count data or normalized contact maps obtained through existing approaches.
Programming languages:
R
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Stability:
Stable

versioning

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HSA distribution

download

HSA support

Documentation

Maintainer

  • Zhengqing Ouyang <>

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Publications

Institution(s)

The Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Department of Statistics, University of Connecticut, Storrs, CT, USA; Institute for Systems Genomics, University of Connecticut, Farmington, CT, USA; Department of Biomedical Engineering, University of Connecticut, Storrs, CT, USA; Department of Genetics and Genome Sciences, University of Connecticut, Farmington, CT, USA; Institute for Collaboration on Health, Intervention, and Policy, University of Connecticut, Storrs, CT, USA; Center for Quantitative Medicine, University of Connecticut, Farmington, CT, USA; The Connecticut Institute for the Brain and Cognitive Sciences, University of Connecticut, Storrs, CT, USA

Funding source(s)

The work is supported by a faculty start-up fund from the Jackson Laboratory for Genomic Medicine, the Research Starter Grant in Informatics from PhRMA Foundation, and the CHIP Faculty Affiliate Seed Grant at UConn.

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