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|Alternative name||Helminth Secretome Database|
|Restrictions to use||None|
|Database management system||MySQL|
|User data submission||Not allowed|
Publication for Helminth Secretome Database
Genome analysis of Excretory/Secretory proteins in Taenia solium reveals their Abundance of Antigenic Regions (AAR)
[…] support for these 44 proteins (). To test whether our obtained AAR values are similar to other known secretomes, we selected the secretomes of 12 helminth species which were recently reported in the Helminth Secretome Database (HSD) and their AAR values were calculated. contains the AAR values for the 12 helminth secretomes (4 nematodes, 4 trematodes and 4 cestodes). Interestingly, the obtained […]
Comparative transcriptome profiling approach to glean virulence and immunomodulation related genes of Fasciola hepatica
[…] e tblastx and blastx, respectively (E value < 10−5).To determine pathogen database related liver fluke transcripts, all F. hepatica transcript sequences were searched against protein sequences of the helminth secretome database (HSD; including secretory databases for nematodes; n = 16,460, trematodes; n = 1,409, cestodes; n = 1,123, and a collection for experimentally determined excretory/secretor […]
Deep mRNA Sequencing of the Tritonia diomedea Brain Transcriptome Provides Access to Gene Homologues for Neuronal Excitability, Synaptic Transmission and Peptidergic Signalling
[…] osecretome database from the Tritonia TSA, derived from a dataset of 9,832 completely non-redundant protein sequences (). Our criteria for selection was similar to that recently used for generating a helminth secretome database , where sequences were filtered based on the presence of an N-terminal signal peptide (SignalP ), the absence of transmembrane helices (tmHMM ), and the absence of mi […]
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