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Publication for HSLPred
In Silico Structural and Functional Characterization of a V. cholerae O395 Hypothetical Protein Containing a PDZ1 and an Uncommon Protease Domain
[…] The CELLO output gave significant reliability for outer membrane (1.493), periplasmic (1.477) and extracellular (1.426). SignalP predicted it as a non-secretory protein. Localization study using the HSLpred and the SubLoc v1.0 servers , both predicted it to be a periplasmic protein. This may be because of the fact that the PDZ domains of DegP proteins have been observed to be crucial for membran […]
A New Method for Predicting the Subcellular Localization of Eukaryotic Proteins with Both Single and Multiple Sites: Euk mPLoc 2.0
[…] benchmark dataset in excluding homologous sequences, or the more subcellular locations it covers, the more difficult for a predictor to yield a high overall success rate. For instance, ProtLock and HSLPred are two predictors developed for identifying protein subcellular localization. Both were reported with the success rates over 70–80% , when tested by the benchmark datasets that allow inclus […]
Semi supervised protein subcellular localization
[…] arly adopted in bioinformatics and is shown to perform relatively better compared to many others. There are also a large number of specialized databases are exploited such as DBSubLoc , ESLPred , HSLpred , LOCSVMPSI , LOC3d , PSORTb , PSORT , LOCtree , BaCelLo , TargetP , SecretomeP , PredictNLS , WoLF PSORT , Proteome Analyst , and CELLO .In this paper, we present a […]
Identification of a subunit of NADH dehydrogenase as a p49/STRAP binding protein
[…] using web-based and/or freely-downloaded bioinformatic tools, including "PSORT II" , "iPSORT" , "WoLF PSORT", "BaCelLo" , "pTARGET" , "CELLO version 2" , "Golgi Localization Predictor" , "HSLPred" , "GoCore" and "SignalP" . […]
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