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HTqPCR | High-throughput analysis and visualization of quantitative real-time PCR data in R

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A package for the R statistical computing environment, to enable the processing and analysis of qPCR data across multiple conditions and replicates. HTqPCR performs quality assessment, normalization, data visualization and statistical significance testing for Ct values between features (genes and microRNAs) across multiple biological conditions, such as different cell culture treatments, comparative expression profiles or time-series experiments. As it is R based, HTqPCR runs on different operating systems and is easy to incorporate into an analysis pipeline, or used in conjunction with other tools available through the Bioconductor project.

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HTqPCR forum

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HTqPCR classification

HTqPCR specifications

Unique identifier:
OMICS_02314
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Stability:
Stable

HTqPCR distribution

versioning

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No versioning.

HTqPCR support

Documentation

Credits

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Publications

Institution(s)

EMBL European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, UK

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