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HTqPCR | High-throughput analysis and visualization of quantitative real-time PCR data in R


A package for the R statistical computing environment, to enable the processing and analysis of qPCR data across multiple conditions and replicates. HTqPCR performs quality assessment, normalization, data visualization and statistical significance testing for Ct values between features (genes and microRNAs) across multiple biological conditions, such as different cell culture treatments, comparative expression profiles or time-series experiments. As it is R based, HTqPCR runs on different operating systems and is easy to incorporate into an analysis pipeline, or used in conjunction with other tools available through the Bioconductor project.

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HTqPCR classification

HTqPCR specifications

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Command line interface
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HTqPCR distribution


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HTqPCR support



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EMBL European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, UK

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