HubPredictor statistics

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Citations per year

Number of citations per year for the bioinformatics software tool HubPredictor
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Tool usage distribution map

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Associated diseases

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Popular tool citations

chevron_left Peak calling Topologically domain calling Data integration Data integration chevron_right
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HubPredictor specifications

Information


Unique identifier OMICS_09732
Name HubPredictor
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.0
Stability Beta
Requirements
bartMachine
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Jialiang Huang

Publication for HubPredictor

HubPredictor citation

library_books

A critical assessment of topologically associating domain prediction tools

2017
Nucleic Acids Res
PMCID: 5389712
PMID: 28334773
DOI: 10.1093/nar/gkx145

[…] ), TADbit (bioRxiv 036764), TADTree () and TopDom (). These include the most commonly used tools for which publicly available software was available at the time of our study. While other tools exist (HubPredictor (), calTADs (Zenodo 59188), HiCdatR (), Matryoshka (biorxiv 032953)), we were unable to include them in this study because of difficulties of installation, execution or interpretation of […]


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HubPredictor institution(s)
Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA, USA; Department of Biostatistics, Harvard TH Chan School of Public Health, Boston, MA, USA

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