HIPPIE specifications

Unique identifier:
OMICS_02899
Interface:
Web user interface
Input data:
A single UniProt identifier (id or accession), gene symbol, Entrez gene ids.
Output format:
JS, MITAB, TXT
Version:
2.0
Maintained:
Yes
Name:
Human Integrated Protein-Protein Interaction rEference
Restrictions to use:
None
Output data:
Show in browser - text (output the table of interactions in the browser), show in browser - visualization (use Cytoscape.js to visualize the constructed subnetwork), HIPPIE tab file format (the interactions are written to a simple text file), PSI-MI TAB 2.5 output format (interactions are written to the standardized MITAB format)
Computer skills:
Basic
Stability:
Stable
  • Animals
    • Homo sapiens

HIPPIE support

Documentation

Maintainer

  • Miguel A. Andrade-Navarro <>

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Publications

Institution(s)

Faculty of Biology, Johannes Gutenberg Universität, Mainz, Germany; Institute of Molecular Biology, Mainz, Germany; EMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain; Universität Pompeu Fabra (UPF), Barcelona, Spain

Funding source(s)

This work was supported by German Research Foundation [SCHA 1933/1-1]; Spanish Ministry of Economy and Competitiveness, ‘Centro de Excelencia Severo Ochoa 2013–2017’ [SEV-2012-0208]; European Union Seventh Framework Programme (FP7/2007- 2013) [n◦ HEALTH-F4-2011-278568 (PRIMES)]; Spanish Ministerio de Economía y Competitividad [Plan Nacional BIO2012-39754]; European Fund for Regional Development (EFRD).

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