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Human Splicing Finder HSF

Predicts the effects of mutations on splicing signals or to identify splicing motifs in any human sequence. HSF contains all available matrices for auxiliary sequence prediction as well as new ones for binding sites of the 9G8 and Tra2-beta Serine-Arginine proteins and the hnRNP A1 ribonucleoprotein.

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HSF classification

  • Animals
    • Homo sapiens

HSF specifications

Interface:
Web user interface
Input data:
A single sequence
Version:
3.0
Maintained:
Yes
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable

Credits

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Publications

Institution(s)

INSERM, U827; CHU Montpellier, Hôpital Arnaud de Villeneuve, Laboratoire de Génétique Moléculaire; Université Montpellier, UFR Médecine, Montpellier, France

Funding source(s)

European Community Seventh Framework Program (FP7/2007-2013) under grant agreement number 200754—the GEN2PHEN project; the European Community Sixth Framework Program (FP6) under grant agreement number 036825; TREAT-NMD Network of Excellence

Link to literature

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