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Hydroxylation site prediction software tools | Post-translational modification analysis

Hydroxylation is an important post-translational modification and closely related to various diseases. Besides the biotechnology experiments, in silico prediction methods are alternative ways to identify the potential hydroxylation sites.Source…
iHyd-PseCp
Web

iHyd-PseCp

Predicts the identifying protein hydroxylation sites. iHyd-PseCp is a predictor…

Predicts the identifying protein hydroxylation sites. iHyd-PseCp is a predictor that incorporates the sequence-coupled information into the general pseudo amino acid composition (PseAAC). It can…

RF-Hydroxysite
Web

RF-Hydroxysite

Identifies putative hydroxylysine and hydroxyproline residues in proteins.…

Identifies putative hydroxylysine and hydroxyproline residues in proteins. RF-Hydroxysite was tested with the jack-knife cross validation method and an independent test set. It is able to annotate…

OH-PRED
Desktop

OH-PRED

Predicts protein hydroxylation sites. OH-PRED is based on the adapted normal…

Predicts protein hydroxylation sites. OH-PRED is based on the adapted normal distribution bi-profile Bayes (ANBPB) feature extraction and physicochemical property indexes of the amino acids (AAPPI).…

PredHydroxy
Web

PredHydroxy

A method to automate the prediction of the proline and lysine hydroxylation…

A method to automate the prediction of the proline and lysine hydroxylation sites based on position weight amino acids composition, 8 high-quality amino acid indices and support vector machines. The…

iHyd-PseAAC
Web

iHyd-PseAAC identify Hydroxylation by Pseudo Amino Acid Composition

A predictor is proposed by incorporating the dipeptide position-specific…

A predictor is proposed by incorporating the dipeptide position-specific propensity into the general form of pseudo amino acid composition. It was demonstrated by rigorous cross-validation tests on…

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